sevenbridges-python documentation!¶
sevenbridges-python is a Python library that provides an interface for the Seven Bridges Platform and Cancer Genomics Cloud public APIs.
The Seven Bridges Platform is a cloud-based environment for conducting bioinformatic analyses. It is a central hub for teams to store, analyze, and jointly interpret their bioinformatic data. The Platform co-locates analysis pipelines alongside the largest genomic datasets to optimize processing, allocating storage and compute resources on demand.
The The Cancer Genomics Cloud (CGC), powered by Seven Bridges, is also a cloud-based computation environment. It was built as one of three pilot systems funded by the National Cancer Institute to explore the paradigm of colocalizing massive genomics datasets, like The Cancer Genomics Atlas (TCGA), alongside secure and scalable computational resources to analyze them. The CGC makes more than a petabyte of multi-dimensional data available immediately to authorized researchers. You can add your own data to analyze alongside TCGA using predefined analytical workflows or your own tools.
Content¶
- Installation
- Get the Code
- Quickstart
- Authentication and Configuration
- How to use the Quickstart
- Initializing the library
- Proxy configuration
- Low level configuration
- Rate limit
- Error Handlers
- Resource
- Managing users
- Managing projects
- Managing datasets
- Manage billing
- Managing files and folders
- Managing file upload and download
- Managing volumes: connecting cloud storage to the Platform
- Managing divisions
- Managing apps
- Managing tasks
- Managing bulk operations
- Managing automations
- Managing async operations
- Managing DRS bulk imports
- sevenbridges package
- sevenbridges-python
Api
App
AppCopyStrategy
AppRawFormat
AsyncFileOperations
AsyncJob
AsyncJobStates
Automation
AutomationMember
AutomationPackage
AutomationRun
AutomationRunActions
AutomationStatus
BadRequest
BillingGroup
BulkRecord
Config
Conflict
DRSImportBulk
Dataset
Division
DivisionRole
Endpoints
ExecutionDetailsInvalidTaskType
Export
File
FileStorageType
Forbidden
Import
ImportExportState
Invoice
LocalFileAlreadyExists
Marker
Member
MethodNotAllowed
NotFound
PaginationError
PartSize
Permissions
Project
ReadOnlyPropertyError
RequestTimeout
ResourceNotModified
SbgError
ServerError
ServiceUnavailable
Task
TaskStatus
TaskValidationError
Team
TeamMember
TooManyRequests
TransferState
Unauthorized
User
ValidationError
Volume
VolumeAccessMode
VolumeObject
VolumeType
- Subpackages
- Submodules
- sevenbridges.api module
- sevenbridges.config module
- sevenbridges.decorators module
- sevenbridges.errors module